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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889409.1_cds_XP_016444103.1_39201
CDS Infomation

[gene=LOC107769410] [db_xref=GeneID:107769410] [protein=interferon-related developmental regulator 1-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016444103.1] [location=complement(join(<136..225,315..365,444..521,601..910,1129..1238,1529..1639,1729..1844,1949..2031,3053..3133,4837..5002,5261..5270))] [gbkey=CDS]
Sequence

ATGGGAAGAAAGAGTTCGCAAAGGAAGAATGCGGTGATGTTGGATAGTGATGACGCGGAT
AGCGTGAGTTCATTGTCAACTTCTCGGTCAGATATGATAGTGTCAGGTGTAGAGGAGGTT
CAAGTTGACAAGGAGACTTTGCTTGATCAATGCGTCGATGCCCTCTATGAGAAAAGGGGA
TCAACAAGAGAGAACGCTCTTGCGTCTATTATAGAAGCCTTCAATAGCGACATACAACAT
GAGTTTGTTGAAAAGAAGTTTGCCACTTTGTTGCAACAATGTCTGAATTCCATTAAACGG
GGCTCCTCCAAGGAGATAGCTTTGGCATCTCATTTTCTTGGAATTTTGGCTTTAACTGTT
GGTCCTGGGGAAAAAGCACATGAAATGTTGGAAGAATTAGTGTCTCCTATTACAGAGGCT
CTTAAATCTCGTTCTGAGACATCTAAGATATCTTCGCTACTGGAGTGTTTGGCCATTATC
ACTTTTGTTGGAGGTGAAGAGGCAGAGGAAACAGACAAGTCAATGCAATTGATGTGGCAA
GTCATTCATCCAAAAATTGGTCCTAATGTAGCTACTGCTAAACCTTCACCACGAATGATA
ACTGCAATGGTATCTGCGTGGTCTTTCCTCCTTACTACCATTGATGGACGGGCAGTAAAC
CCAAAAAGCTGGCAAGGGTCAATCTCTTACTTTTCAACTCTGCTGGACAAGGATGACAGA
GCTGTACGCATTGCAGCTGGCGAAGCACTTGCTTTAGTTTTCGAAGTCGGGAGTCTTGAG
AAGTTCTCTGTTGAAGATAAAGGATCTACTGACAGCTCCACAGATGAAGCAAACAAATCT
AAGCATATTTTGCATATCCAAGGATTAAGAGAGAAGGTCCTGAACCAGATGAGAAGCCTT
TCAGTAGAGGCCGGAGGCAAAGGATCAGCCAAGAAGGACCTCAACAGCCAAAGAAACACA
TTTCGAGATATCTTGGAATTCCTTGAGGATGGATATACTCCAGAGAGCTCAATGAAGATT
GGTGGGGAGTCGCTTACCACAAGCACCTGGCGTCAACTGATACAGTTAAACTTCCTAAAG
CACTTCCTTGGAGGAGGTTTTGTGAAGCACATGCAGGAAAATGAATTTCTTCATGATGTC
GTTGGTTTCACACTGAAGAGAAAATTGCTTTCGGGTGTTGGGCATCGTGTATCTGGAACA
GAAAAG

Peptide Sequence

PEP ID

XP_016444103.1
PEP Infomation

PREDICTED: interferon-related developmental regulator 1-like, partial [Nicotiana tabacum]
Sequence

MGRKSSQRKNAVMLDSDDADSVSSLSTSRSDMIVSGVEEVQVDKETLLDQCVDALYEKRG
STRENALASIIEAFNSDIQHEFVEKKFATLLQQCLNSIKRGSSKEIALASHFLGILALTV
GPGEKAHEMLEELVSPITEALKSRSETSKISSLLECLAIITFVGGEEAEETDKSMQLMWQ
VIHPKIGPNVATAKPSPRMITAMVSAWSFLLTTIDGRAVNPKSWQGSISYFSTLLDKDDR
AVRIAAGEALALVFEVGSLEKFSVEDKGSTDSSTDEANKSKHILHIQGLREKVLNQMRSL
SVEAGGKGSAKKDLNSQRNTFRDILEFLEDGYTPESSMKIGGESLTTSTWRQLIQLNFLK
HFLGGGFVKHMQENEFLHDVVGFTLKRKLLSGVGHRVSGTEKRLYKSPNSVTNKARTQFR
NKQRMLSQDKNV

Transcript Sequence

Gene sequence data has not been registered.